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RA + PhD Micro + PhD Metrics would be ideal, provided you feel you have the skills to get good grades in the phd classes.
and ra would be particularly valuable for an ms student, since a US-based master program usually won't focus on research, and is not a typical route into phd programs. a letter from the ra advisor would be good, especially if you can convince them to let you make some creative inputs to the project. (or at least impress them with your understanding of their project)
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